PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698774.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | DBB | ||||||||
Protein Properties | Length: 242aa MW: 26424.9 Da PI: 5.8383 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.5 | 2.1e-06 | 5 | 46 | 6 | 41 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ ++ + C ++ lC++C +e H H++ p XP_020698774.1 5 CDVCKTAAAAVICCADEAALCAKCDVEVHAAnklagkHRRLP 46 ******99*********************6678888998877 PP | |||||||
2 | zf-B_box | 30.5 | 7.4e-10 | 53 | 94 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ +++k + +fC +++ l+C+dC +++H H XP_020698774.1 53 KLPRCDICQDKAAFIFCVEDRALFCQDCDEAIHIAgtlsgnH 94 789******************************224555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MRIGCDVCKT AAAAVICCAD EAALCAKCDV EVHAANKLAG KHRRLPLSCD TSKLPRCDIC 60 QDKAAFIFCV EDRALFCQDC DEAIHIAGTL SGNHQRLLAT GIRVGLISAQ NMDSNKHHSE 120 PPNGHSMTQT CKKIPAKKQT PSASSIPSAW AVDDFLQLSD YESGYKKDSS VGFGELSWFT 180 DISFSHEGAS EGSLSQAEVP EMLFKQPSSE SFYRLPKPNM PYKNPRIGML EDEDFFTVPD 240 LG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 2e-67 | DBB family protein |