PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698520.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 555aa MW: 61176.2 Da PI: 7.2317

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	391	423	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gL+ +qV++WF N R + XP_020698520.1 391 HPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 423 89*****************************88 PP
2	BELL	114.6	5e-37	243	311	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++kkakLl ++eeV++rYkqy++q+q+v+ssFe vagl sa+pYt+lAlka+S+hFrcLk ai++q+ XP_020698520.1 243 EVEQKKAKLLYMQEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYTTLALKAVSKHFRCLKSAISDQL 311 7899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MLPHVAQHIR REKLRVQPSY DPSTLPPQLD FPASDSSSFL NPFEPSSALW KTDWILHNCT 60 NPAELHLPSL PFSPYPLHEV VSSSGLDLSP SPALLPPPPP FDSGNELLLL PNYASANSGS 120 VWTARSHSDG QRLSLSLASN PPQEILADRW LPVQGISGGR QTAGPLGPFT GYAAILKSSR 180 FLKPAQQLLD EFCSVVTGAR VGKDYDSGSS VAASSSSFQS STDIVGVEGG GGCHSGEIQY 240 WPEVEQKKAK LLYMQEEVCR RYKQYHQQMQ MVVSSFESVA GLSSATPYTT LALKAVSKHF 300 RCLKSAISDQ LRHVCNVLGE ELMASSPSSS RNDNLTIPKL KYIDQTVRRQ KSGDGNLSFS 360 DNTHPIWRPQ RGLPERAVSV LRAWLFDHFL HPYPTDTDKH MLATQTGLSR NQVSNWFINA 420 RVRLWKPMVE EIHMLETKGM AGMDLNSSSK TMADKATIVQ RSEAQSSKHV LVSSSDEMPM 480 AKSSHCLEHW HEGKRSRIED CAMDAGLMSF AYQGGMDIGG LGAVSLTLGL RQGEGIQPEQ 540 QMRHFGHQML HDFVG

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MLPHVAQHIR REKLRVQPSY DPSTLPPQLD FPASDSSSFL NPFEPSSALW KTDWILHNCT  60
NPAELHLPSL PFSPYPLHEV VSSSGLDLSP SPALLPPPPP FDSGNELLLL PNYASANSGS  120
VWTARSHSDG QRLSLSLASN PPQEILADRW LPVQGISGGR QTAGPLGPFT GYAAILKSSR  180
FLKPAQQLLD EFCSVVTGAR VGKDYDSGSS VAASSSSFQS STDIVGVEGG GGCHSGEIQY  240
WPEVEQKKAK LLYMQEEVCR RYKQYHQQMQ MVVSSFESVA GLSSATPYTT LALKAVSKHF  300
RCLKSAISDQ LRHVCNVLGE ELMASSPSSS RNDNLTIPKL KYIDQTVRRQ KSGDGNLSFS  360
DNTHPIWRPQ RGLPERAVSV LRAWLFDHFL HPYPTDTDKH MLATQTGLSR NQVSNWFINA  420
RVRLWKPMVE EIHMLETKGM AGMDLNSSSK TMADKATIVQ RSEAQSSKHV LVSSSDEMPM  480
AKSSHCLEHW HEGKRSRIED CAMDAGLMSF AYQGGMDIGG LGAVSLTLGL RQGEGIQPEQ  540
QMRHFGHQML HDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	9e-92	TALE family protein