PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698341.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YA
Protein Properties Length: 266aa    MW: 29508.5 Da    PI: 9.9078
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.68.9e-33102158158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+  ksrkpylheSRh hA+rR+Rg+gGrF
  XP_020698341.1 102 EEPVYVNAKQYHGILRRRQSRAKAELEKKT-VKSRKPYLHESRHLHAMRRARGCGGRF 158
                     69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAEKGWKGTI IGYLAGSPCK NGNSPQEQQQ MQPISALLPP MMPEYIMPHT QLELGQSVAC  60
AAYSFSDPYH GMMAAYVPQA LVHPQFLGMP HARMPLPLEM AEEPVYVNAK QYHGILRRRQ  120
SRAKAELEKK TVKSRKPYLH ESRHLHAMRR ARGCGGRFLN TKKNEADSSN SNPETGLASA  180
SVSFGYESLL SDTSANPDSA RARPALQSVL KPHKYTSNSD GYQHSSGFQL SPFHPKQGER  240
MDEGDFSGQR RADLMANQPK KRALAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.16e-45NF-YA family protein