PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27664.3 Da PI: 9.9565 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.6e-16 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+ + +grWvAeI+ ++ r +lg+f+tae Aa a+++a+ l+g XP_020698191.1 36 RYTGVRQSP-SGRWVAEIKG----TaQKIRLWLGTFDTAEAAAHAYDEAACLLRG 85 79*******.7******655....2457**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVQKIGSRKN MDPTVKINET VSKQLSISIG RQQRKRYTGV RQSPSGRWVA EIKGTAQKIR 60 LWLGTFDTAE AAAHAYDEAA CLLRGANTRT NFWPRNQGGF GSSNTGSSSV LSTKVLNQLL 120 ERLEEQRASK SSRHCLSSVP SKSPLFPPPP PSPPPQHQQQ HHKHNQELEL IKRMAYGDLF 180 SEVGTSSAAT THDEIMKGKV QRGGNLVDMD LRLEDFSCFF APLEIEGREK VEIGIYEYWS 240 KLSAAANGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-20 | ERF family protein |