PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698116.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 287aa MW: 32106 Da PI: 4.7403

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	228	262	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL+++q+ +WF N+R ++ XP_020698116.1 228 KWPYPTEADKIALAEATGLDQKQINNWFINQRKRH 262 569*****************************885 PP
2	ELK	37.3	5.9e-13	182	203	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+ LlrKYsgyL+sLkqEFs XP_020698116.1 182 DLKEKLLRKYSGYLSSLKQEFS 203 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MDEMYGLQPD SAFAAAEDLH GLIAAAGYGA AAAAAAAEEE MKARIASHPR YPHLLEAYID 60 CQKVGAPPDI ASLLEDIRRE NAGGERVASS SVILGSDPEL DEFMEMYCDV LVKYRRDLER 120 PFDEATAFLN TMEVQLSDLC KPTCRPALGP YVSDEAVGSS DEELSGGEGE APESHLKGEE 180 RDLKEKLLRK YSGYLSSLKQ EFSKKKKKGK LPKEARQILF EWWTAHYKWP YPTEADKIAL 240 AEATGLDQKQ INNWFINQRK RHWKPADQNM HFSVMDSSST SSFFADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-82	TALE family protein