PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 33141 Da PI: 6.1609 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.2 | 1.1e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G gtW+t ++ g+ R++k+c++rw +yl XP_020698110.1 14 KGPWTPEEDQKLIDYIQKHGHGTWRTLPKNAGLARCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.5 | 5.4e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W+ Ia++++ gRt++++k++w+++ XP_020698110.1 67 RGRFSFEEEEAIIQLHSVLGNK-WSEIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGRVPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGHGTWRTL PKNAGLARCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEEAIIQ LHSVLGNKWS EIAARLPGRT DNEIKNYWNT HIRKRLLRSG 120 IDPVTHRPRI DLLNLSSILN TVLFNQPAQM NTHEFLRIAV NLLQSQQLTS SLVYNPVQFN 180 YASQWQQNEA SSCNLGESLA TPDSNVCYTN NNEQPISNLL YEGSTSELLS DNNVYSDHDS 240 VLSTPVSSLS LTNNSSTIIN SSAEDEKDTY CSTYFDFQIS DLLDMIVSSY EG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 2e-93 | MYB family protein |