PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697986.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 333aa    MW: 37747.7 Da    PI: 7.9125
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1738.7e-5481331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+ +yL+++++++++++ ++i+evdiyk++Pw+Lp+k++ +++ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ s 
  XP_020697986.1   8 LPPGFRFHPTDEELILHYLRNRASSSPCPA-SIIAEVDIYKFDPWELPEKASFGDREWYFFSPRDRKYPNGIRPNRAAASGYWKATGTDKPISS- 100
                     79****************************.89***************99999****************************************9. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++e++g+kk Lvfykgr pkg kt+W+mheyrl
  XP_020697986.1 101 GSENIGVKKALVFYKGRPPKGLKTNWIMHEYRL 133
                     99*****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MSTSAVHLPP GFRFHPTDEE LILHYLRNRA SSSPCPASII AEVDIYKFDP WELPEKASFG  60
DREWYFFSPR DRKYPNGIRP NRAAASGYWK ATGTDKPISS GSENIGVKKA LVFYKGRPPK  120
GLKTNWIMHE YRLADANKSN SYKPIRIRDH SMRLDDWVLC RIYKKSNHLS PTMADQEQED  180
PCGEETCFPA MENQMMPQNH GMKLQKASSI SEFLKDYSPL LNLLDNQPEL PMFDTNSIIG  240
HPLLSQTIIN QSREGNGTGY FLPQLSQADS PVSIGAKRQK MADCNSEESS GILQFLKKQN  300
DLNMFPNFSS QFDVSQYGLL SQPLLRNSNI GSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-84NAC family protein