PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697978.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 313aa    MW: 35854.2 Da    PI: 8.3693
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.21.2e-47111373128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPt+eel+ +yL++ ++gkkl++ ++i ++++y ++PwdLp+++k +e+ewyfF++rd+++++g r+nr+t++g+Wkatg+d+++ s   
  XP_020697978.1  11 PGFRFHPTEEELLEFYLRRAASGKKLNF-DIIGTLNLYLYDPWDLPAMAKIGEREWYFFVPRDRRHSNGGRPNRTTERGFWKATGSDRPIRSVvd 104
                     9*************************99.99***************99999***************************************99877 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  XP_020697978.1 105 PRRLIGLKKTLVYYRGRAPRGSKTDWVMNEYRL 137
                     7889***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MERNGSELDL PGFRFHPTEE ELLEFYLRRA ASGKKLNFDI IGTLNLYLYD PWDLPAMAKI  60
GEREWYFFVP RDRRHSNGGR PNRTTERGFW KATGSDRPIR SVVDPRRLIG LKKTLVYYRG  120
RAPRGSKTDW VMNEYRLPSL PNQSSASQPS KEDIVLCKVY RKATSLKELE HRAAMEEDSR  180
ASHGATVSAT SYDQGDVQSF GYNEAIMEMK EETETTTSTE ISSSTTQFRP LTMPFPVSTE  240
TYQRPTISLE SSADQGQLNP SAKTTANRQL PKLPALQVPN HTSFDWVQDP FLSQLRSPWL  300
DQWSPLYANL LNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.15e-85NAC family protein