PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697968.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

MYB_related

Protein Properties

Length: 483aa MW: 54355.7 Da PI: 9.5831

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26	2.2e-08	369	417	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E ++lv++v ++G g+W+ I + +Rt ++k++w+++l XP_020697968.1 369 AWTLGEVLKLVEGVSRYGAGRWSQIRQVAFasgSHRTSVDLKDKWRNLL 417 7**********************99998999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MMEDILLGCT SSTHQSVTQR QSENEVDTKK VMFKMDVDGP SFGQPNISDT LAKNQSTEAC 60 SEIRKNAVNE AAEGSFSKKF SSLKPDFSLL EGEICLDNFS IRELQEAFRA TFGRYTSVKD 120 KLWLKRRIAM GLTNSCNIPS ANFIIKDNKI VLCNVQEETT SRTQRNMSYP GYIMMNNSTD 180 PLNETLQRTL NDTSSGIVEQ KASFTKALDK SLEKCNVENL NTQMEQCGAK RIRRPTKRYI 240 EEHTEVEVMA YSGRVASLGK TAMHDQHCLK SKVRTPCLVD TSQDLLGGYD ARIPSVLRVR 300 RRPPRKNFLT LVNFVHTERE KMNPEVLNSE QSPHQKHEKF ISSVGAAFHE KSDTVHPVEA 360 SVKRKHHRAW TLGEVLKLVE GVSRYGAGRW SQIRQVAFAS GSHRTSVDLK DKWRNLLKAS 420 FAQVPTDKGI GNSRKPASLP IPTPILLRVR ELADKRSDSE IEFGSSQFVG HGGIVQEKET 480 GFL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MMEDILLGCT SSTHQSVTQR QSENEVDTKK VMFKMDVDGP SFGQPNISDT LAKNQSTEAC  60
SEIRKNAVNE AAEGSFSKKF SSLKPDFSLL EGEICLDNFS IRELQEAFRA TFGRYTSVKD  120
KLWLKRRIAM GLTNSCNIPS ANFIIKDNKI VLCNVQEETT SRTQRNMSYP GYIMMNNSTD  180
PLNETLQRTL NDTSSGIVEQ KASFTKALDK SLEKCNVENL NTQMEQCGAK RIRRPTKRYI  240
EEHTEVEVMA YSGRVASLGK TAMHDQHCLK SKVRTPCLVD TSQDLLGGYD ARIPSVLRVR  300
RRPPRKNFLT LVNFVHTERE KMNPEVLNSE QSPHQKHEKF ISSVGAAFHE KSDTVHPVEA  360
SVKRKHHRAW TLGEVLKLVE GVSRYGAGRW SQIRQVAFAS GSHRTSVDLK DKWRNLLKAS  420
FAQVPTDKGI GNSRKPASLP IPTPILLRVR ELADKRSDSE IEFGSSQFVG HGGIVQEKET  480
GFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17460.1	5e-56	MYB_related family protein