PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697747.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

GRF

Protein Properties

Length: 264aa MW: 30509.1 Da PI: 8.8142

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.3	3.5e-25	82	125	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_020697747.1 82 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 125 79***************************************997 PP
2	QLQ	61.7	2.1e-21	11	46	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l++Ky+a++ P+P++L+++i++ XP_020697747.1 11 PFTASQWQELEHQALIFKYMASGIPIPHDLIVPIRR 46 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MMSGRSSSRY PFTASQWQEL EHQALIFKYM ASGIPIPHDL IVPIRRSFLL DSTSTSPSLA 60 FPPHTQLGWS CFQMGYGRKT EDPEPGRCRR TDGKKWRCSK EAYPDSKYCE RHMHRGKNRS 120 RKPVEISLAT KTNHSSSTSS AQMSPYSANL SISTPEICHH LCPYPSSSVT SPFQLDSANY 180 SDREYRQGAE IRRSSSEFKP QWMSSMAKAK QSNYTLSKEE EEERQRPLRH FFDECPERNK 240 EQWMDMEDES SSYTKTQLSI SFPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-55	GRF family protein