PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697726.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 423aa MW: 46642.9 Da PI: 7.2368

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.5	7.9e-40	111	171	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s XP_020697726.1 111 PDKILPCPRCKSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKSKSSA 171 7899*****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MAESRDPAIK LFGKTIQIPV GVVVSLTIGE EFIGDDEKAP SDKEASPEQM DNNEEAPISR 60 EEEKKNDESN NLANEEKIDQ NSSSPENSNS KADDEQNESN NNPRDKANKK PDKILPCPRC 120 KSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGSMRNVPV GAGRRKSKSS ASHQHFRQIT 180 IADCVQAVPE SIHHLQPLKS NGTVLSFGSD APLCESMASV MKLVEKTVQN RNQKEKEQLS 240 GSPNLNEQVK ASSTSNCYGF PPNVSNINGS PWPYTWTHPP FAFPFYPITA YWGMPWLSPP 300 LSTSPSSGSS CSVSNSPNLG KHSREGNLLN HSHLDKGNTS IPEKSLWAPK TMRVDVPEKL 360 QSVQCGQPLD STLIKADLIS RGGGLFKAFQ SNGDHKNPSN ELSQVLLANP AALSRSFTFQ 420 ESS

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MAESRDPAIK LFGKTIQIPV GVVVSLTIGE EFIGDDEKAP SDKEASPEQM DNNEEAPISR  60
EEEKKNDESN NLANEEKIDQ NSSSPENSNS KADDEQNESN NNPRDKANKK PDKILPCPRC  120
KSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGSMRNVPV GAGRRKSKSS ASHQHFRQIT  180
IADCVQAVPE SIHHLQPLKS NGTVLSFGSD APLCESMASV MKLVEKTVQN RNQKEKEQLS  240
GSPNLNEQVK ASSTSNCYGF PPNVSNINGS PWPYTWTHPP FAFPFYPITA YWGMPWLSPP  300
LSTSPSSGSS CSVSNSPNLG KHSREGNLLN HSHLDKGNTS IPEKSLWAPK TMRVDVPEKL  360
QSVQCGQPLD STLIKADLIS RGGGLFKAFQ SNGDHKNPSN ELSQVLLANP AALSRSFTFQ  420
ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-75	Dof family protein