PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697724.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 357aa MW: 40081.2 Da PI: 7.478 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 6.7e-17 | 96 | 141 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W +eEd +l+ +v +G+ +W++Ia+++ gR++k+c++rw++ XP_020697724.1 96 RGHWRPEEDSKLKALVSIYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 141 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 148 | 191 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l a++++G++ W+ Iar ++ gRt++++k++w+ XP_020697724.1 148 RSAFTEEEEEKLMAAHRLYGNK-WAMIARLFP-GRTDNSVKNHWHV 191 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MAPQHFSSTD NGMANRYIEA KAQEEANSPS PSSSKSFFSQ MVSVPNNPSC SLSTHKFFPF 60 MGNSDTNEVL AENHNRADAE EENLNESTGQ SSLCARGHWR PEEDSKLKAL VSIYGPQNWN 120 LIAEKLEGRS GKSCRLRWFN QLDPTINRSA FTEEEEEKLM AAHRLYGNKW AMIARLFPGR 180 TDNSVKNHWH VIMARKYREQ SNAYRRRKLS QAIDRRVEEI TPNHPFSFSS SIVDYSSFSP 240 HLLPNGGKNS FSAHFGSHTK EKPLDFLSGQ SPRNGDKTKK FITRTWEGQS DHNEALHSFY 300 CHQESNLFAM TASSSSGEGG ENTGQVNRKE EEGRGHMVAS MASSPTFIDF LGVGATT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 1e-73 | MYB family protein |