PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697662.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 236aa    MW: 27055 Da    PI: 8.029
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.27.2e-33156214159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d++vv++tYeg H+h+
  XP_020697662.1 156 LDDGYRWRKYGQKAVKNNHFPRSYYRCTHQGCSVKKQVQRLSKDEEVVVTTYEGIHTHP 214
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
METYSIISSS SSTCCAQHNY SPGHLQPLTA EAIQMNNTYE GLFRATKNYL QSDQSHISST  60
SELSHEVLEA KSMVVALNSG EYSAITSEHK SLKMDTGDDI IDHHRNGHKK KAIFDVEGDD  120
EDDKGRNEVS GGKKKGEKKV RRPRFAFQTR SQVDILDDGY RWRKYGQKAV KNNHFPRSYY  180
RCTHQGCSVK KQVQRLSKDE EVVVTTYEGI HTHPIERNND NFEQILNQMQ IYSRFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-55WRKY family protein