PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697661.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 293aa    MW: 31541.4 Da    PI: 7.7804
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.61.3e-3245100357
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 
                     +v Y+eClkNhAaslGgha+DGCgEfmps +++ +++++lkCaACgCHRnFHRr +
  XP_020697661.1  45 EVIYRECLKNHAASLGGHALDGCGEFMPSLTANpADPTSLKCAACGCHRNFHRRIS 100
                     689**************************99999*******************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
METVTKIRDP DVKLKGFPHP NGEAKKPHRT TSPLPPPQPV QEADEVIYRE CLKNHAASLG  60
GHALDGCGEF MPSLTANPAD PTSLKCAACG CHRNFHRRIS FRHRAAGAAA SGDDCLEGEG  120
ERDGRDDDGE DVDVDGSRPR SPSPSPPPYF SSAPHMLLAL SNGVRDGDSP ACAGKSFTIP  180
TPVVSVTPLR KRFRSKFSPE QKDRMLELSE RLGWRLQKRD EELVEKYCNE IGIGKGVFKV  240
WMHNNKHNLF GHSGSRRGET MSGVSPSAAA ALAGGGAGVH KVDENGNAMN GAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.11e-49ZF-HD family protein