PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697625.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 617aa MW: 68637.2 Da PI: 6.3299

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.9e-09	410	447	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ L+k++gLt +qV++WF N R + XP_020697625.1 410 FEHflHPYPNDSEKLMLSKQTGLTRSQVSNWFINARVR 447 665559******************************88 PP
2	BELL	122.8	1.4e-39	273	344	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+k +kL+ +l+eVd+rYkqy++q+q+v+ssF+a+ag g+akpYt+lAl++iSrhFr+L+dai +qi XP_020697625.1 273 ERQELQSKMTKLVAMLDEVDRRYKQYYHQMQIVVSSFDAIAGSGAAKPYTALALQTISRHFRSLRDAIGDQI 344 79*******************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MRKMATFYPS STNQRDVMGN LYLRDPTGHA MYPESAVNGN MVYLNISSGP YSETLAGSIQ 60 SEQNCIGFTD LVASQLGENA YNSWRDGRNE MLFLQANGES MAGDDSQMGL QSHLGILNEH 120 NLSLQHSNIS NVQGQGLSLS LGMQIPVPSF KYQPNQSDVA ILSSHQSSSG NGEAYRNDDS 180 RSRIQNINVP SYGLSNITSA IPNSKYLKTA QQLLDEVVNV QKALKKKTDC TQSFNTSGKQ 240 ACKDNDGESK SGGSPTNHPG STANSSSELS PSERQELQSK MTKLVAMLDE VDRRYKQYYH 300 QMQIVVSSFD AIAGSGAAKP YTALALQTIS RHFRSLRDAI GDQIRCTRKI LGELDGSTGK 360 GCGISRLRYI DQQIRQQRAI QQLGMMPQHA WRPQRGLPEN SVTILRAWLF EHFLHPYPND 420 SEKLMLSKQT GLTRSQVSNW FINARVRLWK PMVEDMYKEE FGEAEMDSNS SSDNATKFRD 480 EFHSTDTHED QPSSASERIQ AKLSNNESSP NIMAEINVAC ANPGFENELQ DQRQQNSPYI 540 NLLHNAIHHS RFISYPMTEL SRYANGVSLT LGLQHCDGNL QDSEDQQGFL PVRGEDIYNA 600 APLLGFGSSN LLHDYVA

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MRKMATFYPS STNQRDVMGN LYLRDPTGHA MYPESAVNGN MVYLNISSGP YSETLAGSIQ  60
SEQNCIGFTD LVASQLGENA YNSWRDGRNE MLFLQANGES MAGDDSQMGL QSHLGILNEH  120
NLSLQHSNIS NVQGQGLSLS LGMQIPVPSF KYQPNQSDVA ILSSHQSSSG NGEAYRNDDS  180
RSRIQNINVP SYGLSNITSA IPNSKYLKTA QQLLDEVVNV QKALKKKTDC TQSFNTSGKQ  240
ACKDNDGESK SGGSPTNHPG STANSSSELS PSERQELQSK MTKLVAMLDE VDRRYKQYYH  300
QMQIVVSSFD AIAGSGAAKP YTALALQTIS RHFRSLRDAI GDQIRCTRKI LGELDGSTGK  360
GCGISRLRYI DQQIRQQRAI QQLGMMPQHA WRPQRGLPEN SVTILRAWLF EHFLHPYPND  420
SEKLMLSKQT GLTRSQVSNW FINARVRLWK PMVEDMYKEE FGEAEMDSNS SSDNATKFRD  480
EFHSTDTHED QPSSASERIQ AKLSNNESSP NIMAEINVAC ANPGFENELQ DQRQQNSPYI  540
NLLHNAIHHS RFISYPMTEL SRYANGVSLT LGLQHCDGNL QDSEDQQGFL PVRGEDIYNA  600
APLLGFGSSN LLHDYVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-118	TALE family protein