PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 96aa MW: 11073.4 Da PI: 9.3968 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.1 | 2.8e-07 | 22 | 63 | 15 | 54 |
HHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksL 54 ++++ ++L++llP ++ ++++ s + +L++A++YI+sL XP_020697514.1 22 QVRELVSKLQTLLPRqQPlNNDNDTASTSRVLREACNYIRSL 63 5677789********5558888899***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MSSRRSRSSR QAASSSRITE QQVRELVSKL QTLLPRQQPL NNDNDTASTS RVLREACNYI 60 RSLHKEVDNL SERLSELLQN TDNDTDLEAV LRRMLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39860.1 | 1e-20 | bHLH family protein |