PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697480.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 307aa    MW: 34245.4 Da    PI: 6.2712
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.5e-21151201256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+ge
  XP_020697480.1 151 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAYDKAAYRLRGE 201
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAAAIDMYNS RTVISSTEEL MEALEPFIKD ASSSPSSSSI KDTSFDPSSV SLSHLPYSSA  60
HSHHYSVYPP TPPQNPNFDY FPPSMSNPEI THHGFLSLDQ PIGLTHLGPV QIQQIQAQLQ  120
LRHHHNLLSP RPQPMKLTGT AAILPSKPTK LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT  180
FDTAEEAAMA YDKAAYRLRG EFARLNFPHV RHDVAGGQLH SSVDAKLEVF CKNLGNSLKK  240
ESSPPALDSS AGGVEDSKSE MSSEGEVSSP VSEMETLDFT EAPWDESEKF MLTKYPSWEI  300
DWDSILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.16e-49ERF family protein