PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697448.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

CAMTA

Protein Properties

Length: 1033aa MW: 116555 Da PI: 5.9681

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.7	3.6e-56	18	134	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL+nf+ ++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK ++v+vl+cyYah+een++fqr XP_020697448.1 18 LEAQQRWLRPVEICEILQNFRAFRIAPEPPQKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKADSVDVLHCYYAHGEENENFQR 112 5569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +ivlvhylevk XP_020697448.1 113 RTYWMLEEALMHIVLVHYLEVK 134 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1033 aa Download sequence
MAETRRLSRQ FDIEQLLLEA QQRWLRPVEI CEILQNFRAF RIAPEPPQKP PSGSLFLFDR 60 KVLRYFRKDG HNWRKKKDGK TVKEAHERLK ADSVDVLHCY YAHGEENENF QRRTYWMLEE 120 ALMHIVLVHY LEVKGSKGGF NRVKDDDDIA SATRMDSPVC SDSFTGQSHL PSQTMEIGSP 180 NSTQTSVYAD AESADNHHGR SRYHPFVELQ QYVEGPQGDV NFSNTNAPLP SQSSQYEYQE 240 LPSQSKSGCL SVAQENMTKL FNGAGHDLQF NKARTLYNAT SWEEVIGNEV DGFQRAFKTI 300 VTVPGNISGQ DDLEFHELLP DDLISNQKEA ANDQNKANSQ ILDSEGSLVL FKTASQNDLS 360 LNGKMNGPSL LKQASLDLSN VGGDGLKKYD SFSRWMSKEL GEVDDSHMKS SSQSYWNFIE 420 SENVEDSSMT TAEHLDSYTM SPSVSQDQLF SILDFSPNWA FTGFETKVLI TGTFLKDRKD 480 LENCKWSCMF GEVEVPAEII AGGVLRCDTP LHKSGTVPFY ITCSNRLACS EVREFEFRDN 540 YPQCMDTTDS HSHINELYLH VRLGKLLSLG YSDQSTPVDN MTEEKINLSY KISSLLMDSD 600 DEWLNMLETT SGEEFCADSS KDRVLQTLLK EQLHDWLLRK IAEGGKGPCV LDKEGQGVLH 660 LAAAVGYDWA IKPTITAGVG INFRDVRGWT ALHWAAFCGR ERTVVSLVTL GAASGALTDP 720 TPEFPSGRTP ADLASANGHK GIAGFLAESS LTAHLETLTL KNTDNVVISE VTCTKDMEDF 780 VEKYDVNAPG EPSMKDSLTA VRKATLAAAR IHQVFRVQSF QRKKLLQYNE EMSGISDKQA 840 LSRISIKANT TGEHNTPAHV AAIRIQNKFR GWKGRKEFLI IRKRIVKIQA HIRGHQVRKR 900 YKKIVWTVGI MEKVILRWRR KGSGLRGFRS EGLLEGSSGQ EAQPQKEEDY DFLQEGRKQA 960 EARMQKALSR VKSMVQYPEA RDQYSRLLNV VSELQKSNML QDRSSHEVDD VNNGDFMMEF 1020 EELWEEDSNI PAS

Sequence ? help Back to Top

Protein Sequence Length: 1033 aa Download sequence

MAETRRLSRQ FDIEQLLLEA QQRWLRPVEI CEILQNFRAF RIAPEPPQKP PSGSLFLFDR  60
KVLRYFRKDG HNWRKKKDGK TVKEAHERLK ADSVDVLHCY YAHGEENENF QRRTYWMLEE  120
ALMHIVLVHY LEVKGSKGGF NRVKDDDDIA SATRMDSPVC SDSFTGQSHL PSQTMEIGSP  180
NSTQTSVYAD AESADNHHGR SRYHPFVELQ QYVEGPQGDV NFSNTNAPLP SQSSQYEYQE  240
LPSQSKSGCL SVAQENMTKL FNGAGHDLQF NKARTLYNAT SWEEVIGNEV DGFQRAFKTI  300
VTVPGNISGQ DDLEFHELLP DDLISNQKEA ANDQNKANSQ ILDSEGSLVL FKTASQNDLS  360
LNGKMNGPSL LKQASLDLSN VGGDGLKKYD SFSRWMSKEL GEVDDSHMKS SSQSYWNFIE  420
SENVEDSSMT TAEHLDSYTM SPSVSQDQLF SILDFSPNWA FTGFETKVLI TGTFLKDRKD  480
LENCKWSCMF GEVEVPAEII AGGVLRCDTP LHKSGTVPFY ITCSNRLACS EVREFEFRDN  540
YPQCMDTTDS HSHINELYLH VRLGKLLSLG YSDQSTPVDN MTEEKINLSY KISSLLMDSD  600
DEWLNMLETT SGEEFCADSS KDRVLQTLLK EQLHDWLLRK IAEGGKGPCV LDKEGQGVLH  660
LAAAVGYDWA IKPTITAGVG INFRDVRGWT ALHWAAFCGR ERTVVSLVTL GAASGALTDP  720
TPEFPSGRTP ADLASANGHK GIAGFLAESS LTAHLETLTL KNTDNVVISE VTCTKDMEDF  780
VEKYDVNAPG EPSMKDSLTA VRKATLAAAR IHQVFRVQSF QRKKLLQYNE EMSGISDKQA  840
LSRISIKANT TGEHNTPAHV AAIRIQNKFR GWKGRKEFLI IRKRIVKIQA HIRGHQVRKR  900
YKKIVWTVGI MEKVILRWRR KGSGLRGFRS EGLLEGSSGQ EAQPQKEEDY DFLQEGRKQA  960
EARMQKALSR VKSMVQYPEA RDQYSRLLNV VSELQKSNML QDRSSHEVDD VNNGDFMMEF  1020
EELWEEDSNI PAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein