PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697328.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

MYB_related

Protein Properties

Length: 447aa MW: 50419.4 Da PI: 9.6829

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	130	171	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eE + l d ++++ + + Ia ++++ Rt +++ksr+++ XP_020697328.1 130 WTKEETDHLFDMCERFDLR-FIVIADRFPTSRTVEELKSRYYS 171 *****************.*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MDAKDILGLP KSFPGTQEKK PRQQKEPQRK PDGISREVYA LTGGIAPLMP TIEVSHLKRR 60 PVADKEKITW QWLPFTNSAR TDNLMLYHWV RVVNGVPPTG DYQFAKYNKS VDVVKYTDEE 120 YEKYLTDSMW TKEETDHLFD MCERFDLRFI VIADRFPTSR TVEELKSRYY SVSRALLIAR 180 APSVADVAGH PLVKEPYDMA YEMERKRALS AVLSRTKQQE IKDTEILSEA KRIMESRIAS 240 KGVENVDLPD DHTDIEIIEK GTHVESPSPS SNMHPSSTAV PSAAITENAS TPASLRMLRV 300 YLRTHALDQM VQAASSNAGP RTIKRVEQTL SDLGVHIKPK VPTKAVCAEH LELRKEILTL 360 FNLQKQLQNK EAEASATRDT SFTEAPGTPK RSYRGDADRP FVSEAVGFGG ERMGKRDQKR 420 KAPGRFMDAP PSPPQSKRPR KLKASDG

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MDAKDILGLP KSFPGTQEKK PRQQKEPQRK PDGISREVYA LTGGIAPLMP TIEVSHLKRR  60
PVADKEKITW QWLPFTNSAR TDNLMLYHWV RVVNGVPPTG DYQFAKYNKS VDVVKYTDEE  120
YEKYLTDSMW TKEETDHLFD MCERFDLRFI VIADRFPTSR TVEELKSRYY SVSRALLIAR  180
APSVADVAGH PLVKEPYDMA YEMERKRALS AVLSRTKQQE IKDTEILSEA KRIMESRIAS  240
KGVENVDLPD DHTDIEIIEK GTHVESPSPS SNMHPSSTAV PSAAITENAS TPASLRMLRV  300
YLRTHALDQM VQAASSNAGP RTIKRVEQTL SDLGVHIKPK VPTKAVCAEH LELRKEILTL  360
FNLQKQLQNK EAEASATRDT SFTEAPGTPK RSYRGDADRP FVSEAVGFGG ERMGKRDQKR  420
KAPGRFMDAP PSPPQSKRPR KLKASDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	1e-177	MYB_related family protein