PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GATA | ||||||||
Protein Properties | Length: 261aa MW: 28094.6 Da PI: 8.2328 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.6 | 2.6e-16 | 182 | 218 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C+ + Tp++Rrgpdg++tLCnaCGl+++ kg+ XP_020697167.1 182 CYHCHISAkdTPMMRRGPDGPRTLCNACGLMWANKGT 218 99**987778************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MSENPSSPVA EEPMAGGMEG LHESAGSLVS IDGDATTDHG VSIVPHVGGS QLTLSFQGEV 60 YVFDCVSPEK VQSVLLLLGG REVAAPLPSP PTSSTNQLNK RFNFSHRVAS LMRFREKRKE 120 RNFDKKIRYD VRKEVALRMQ RNKGQFTSSK SKAEGTLPGF AGMDSTSYLA AENGQPQTAS 180 ACYHCHISAK DTPMMRRGPD GPRTLCNACG LMWANKGTLR DLSKSPVTFQ HQTLESKDGE 240 GATATGQPTA AVPSNGQEIS H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 1e-72 | GATA family protein |