PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 331aa MW: 35459.5 Da PI: 10.3779 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.1 | 1.3e-31 | 260 | 317 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeH+h+ XP_020697141.1 260 DEYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERAPDDPSMLIVTYEGEHRHS 317 9*************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MAVDLIGYAK MDDQITIQEA AAAGIRSMEN LIFQLNRHHQ KSTSSSATAA TIDCREIADH 60 TVSKFKKMIS ILNRTGHARF RRGPSSPILP AAVKPTPQVA VLPSAPAMAV PVVPLQSLTL 120 DFTKPSSVGG GSTDLAIVAA SSGKYIKETF SISTPISSAN SSFMSSITGD GSVSNGRPGG 180 TTSLLLPPAP AISAGGVVAG KPPLAAYKKR CHSHAHSEDF AGKFAANGGR CHCSKRRKNR 240 VKRTIRVPAI SSKMADIPPD EYSWRKYGQK PIKGSPYPRG YYKCSSLRGC PARKHVERAP 300 DDPSMLIVTY EGEHRHSQPS DALVFDTHRE I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 1e-106 | WRKY family protein |