PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 206aa MW: 24243.9 Da PI: 8.6507 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.7e-19 | 85 | 139 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++t+eq + Le+ F ++++++ ++eeLAkklgL rqV vWFqNrRa+ k XP_020697131.1 85 RKKLRLTNEQSTLLERSFCSHKTLTSIQKEELAKKLGLRPRQVEVWFQNRRARTK 139 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 119.9 | 1.4e-38 | 85 | 172 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl++eq++lLE+sF ++++L++ +K+ela++Lgl+prqv+vWFqnrRARtk+kq+E+d+e Lkr++d+l++en+rL++e +eLr XP_020697131.1 85 RKKLRLTNEQSTLLERSFCSHKTLTSIQKEELAKKLGLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCDNLSDENRRLRRELNELR 172 69************************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MGEELCDTQL TLAIKGGGFS ATQHSYRREV TKPPVRLHLC FPPFLKKEED EEREQKTNSM 60 ELKNLQMNKS KNKKEDNEDV HGMIRKKLRL TNEQSTLLER SFCSHKTLTS IQKEELAKKL 120 GLRPRQVEVW FQNRRARTKL KQTEVDCELL KRCCDNLSDE NRRLRRELNE LRFYASKVED 180 MRVCPSCESL MAEEEEKKPG VLQLCI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 134 | 142 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 4e-32 | HD-ZIP family protein |