PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020697108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 21631.7 Da PI: 8.858 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.2e-19 | 51 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a+k + g XP_020697108.1 51 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAAKFMCG 100 69******9.**********8.....334***********************9976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 190 aa Download sequence |
MCLGCLQKRT RLGVLFHSIF YHLSLYKRKA AGPLSSQNSN QNKQRMPKLQ RYRGVRQRHW 60 GSWVSEIRHP LLKTRIWLGT FETAEDAARA YDEAAKFMCG ARARTNFPPN SSSASALSPS 120 LVAKLEKCCI ASQEEMIRAK AEMEREEMKC MDDEFIEEMI EELRYYGSME ISSSYSSSSS 180 SSTSCSNSIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25190.1 | 2e-26 | ERF family protein |