PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 331aa MW: 37779 Da PI: 5.9892 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.9 | 1.4e-51 | 3 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd elv ++Lk+kv+g k+el evi+ +d+yk++Pw+Lp k + +++ ew+fF++r++ky++g+r+nrat+sgyWkatgkd++++ XP_020697066.1 3 LPPGFRFHPTDVELVEYFLKRKVDGLKIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRNQKYPNGSRTNRATSSGYWKATGKDRKII 96 79****************************.99**************95344555788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +gl+ktL fy+grap ge+tdWvmheyrl XP_020697066.1 97 C-ESSIKGLRKTLFFYRGRAPGGERTDWVMHEYRL 130 *.9999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MSLPPGFRFH PTDVELVEYF LKRKVDGLKI ELEVIPVIDL YKFDPWELPE KSFLPKRDME 60 WFFFCPRNQK YPNGSRTNRA TSSGYWKATG KDRKIICESS IKGLRKTLFF YRGRAPGGER 120 TDWVMHEYRL YDDLPQGNIS FLGAFALCRV VKRSDHLHQL GEAKAKMALD SSTSEICKTK 180 CSSEVINLLD LGNDTFPEAF SYGNSFEVAQ HIADSCQTKY QSPLVLSRAS KIISLENDIS 240 EKIFPTPFPT YSTETCQING MSPVASCSSF TDEASICPSP MHCMNFYFNE ENMSVPGFEA 300 WNPMIYTPLC RQASADEPNL CSQEDSFKYM V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 6e-82 | NAC family protein |