PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020696897.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 285aa    MW: 31206.6 Da    PI: 9.1166
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020696897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.27.1e-3285139459
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     v+Y+eClkNhAas+Gg a+DGCgEfmp  geegt +alkC+AC+CHRnFHR+e + 
  XP_020696897.1  85 VKYRECLKNHAASIGGSATDGCGEFMPC-GEEGTLEALKCSACNCHRNFHRKEIDG 139
                     79*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MNISGHEVGM PIPITSTYVG GGGGHGQSQS HSSHFIQHES PSLHHLKLHP SNGPSPLTPP  60
PPPPPQAATP LSVATPLNSK KGVLVKYREC LKNHAASIGG SATDGCGEFM PCGEEGTLEA  120
LKCSACNCHR NFHRKEIDGE LSSCDLFHFK GGSKLIGQKG LLISGTDPFG YNPAGNSLIP  180
RPSPHQMIMP FGAIQTSESD EMEGYGGAMT RPPMMKKRFR TKFTSEQKEK MFSFAEKVGW  240
RLQKQEENVV QQFCQEIGVK RRVLKVWMHN NKHNLSKKNS NLQLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.13e-66ZF-HD family protein