PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020696788.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 198aa MW: 23229.4 Da PI: 7.4135 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.8 | 8.8e-19 | 38 | 91 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq++ Le F ++r++ +++e LA +lgL+ +qV vWFqNrRa++k XP_020696788.1 38 KKRKLSDEQVKLLEFSFMRERKLECRRKESLAVELGLDPKQVAVWFQNRRARWK 91 56799************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 106.6 | 1.8e-34 | 38 | 129 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+ls+eqvklLE sF +e+kLe +rK++la eLgl+p+qvavWFqnrRAR+k++++E++y +Lk++ ++ + e+++Lekev +L+e+l++ XP_020696788.1 38 KKRKLSDEQVKLLEFSFMRERKLECRRKESLAVELGLDPKQVAVWFQNRRARWKSRKMEEEYLRLKSENEEAVVEKCQLEKEVLKLKERLSK 129 9**************************************************************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEYSYLMSSG FTDNTPQGGK RLRRWQKKAV VAAAAEAKKR KLSDEQVKLL EFSFMRERKL 60 ECRRKESLAV ELGLDPKQVA VWFQNRRARW KSRKMEEEYL RLKSENEEAV VEKCQLEKEV 120 LKLKERLSKT EEEISRLSIG ISGDQKDVRA LESSSSSLST VNHEVVAEDI NAVDWQEYFI 180 DFMYSNYWIG WGDDFHGM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66700.1 | 1e-26 | HD-ZIP family protein |