PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020696732.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 220aa MW: 24949.8 Da PI: 7.0803 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 65 | 111 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 r +WT+eE + + +a ++ + +W +Ia+ ++ ++++++ +++ XP_020696732.1 65 RANWTPEENKAFEKALVDMPDEtpdRWLRIASQIP-SKSPEDIHLHYI 111 568*****************99*************.**********96 PP | |||||||
2 | Myb_DNA-binding | 41.7 | 2.6e-13 | 156 | 200 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++++ +++G g+W+ I+r k+Rt+ q+ s+ qk+ XP_020696732.1 156 PWTEDEHRRFLEGLERFGRGDWRNISRWAVKTRTPTQVASHAQKF 200 8******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MIKVGVPISA PTDEDFALNS RPVRCPCGAP SRHLAISIRH YSSNADMNGS HQHIATGSGN 60 IPTNRANWTP EENKAFEKAL VDMPDETPDR WLRIASQIPS KSPEDIHLHY IALLHDIALI 120 DSGGFDLPEY DEDEDDPIGR SPDQQPAKDG RRKGVPWTED EHRRFLEGLE RFGRGDWRNI 180 SRWAVKTRTP TQVASHAQKF YLRQNVKKES KRKSIHDITS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-47 | MYB family protein |