PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696524.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 428aa MW: 48101.8 Da PI: 5.3376

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.9	2.5e-33	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 lp G++F+P+d+el+ ++L +kv++ ++ e+i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + XP_020696524.1 58 LPHGVKFDPSDQELL-QHLMAKVRKAGaephpfIN--EFIPTVEkdegICYTHPQKLP-GVKQDGSASHFFHRTFKAYNTGTRKRRKINtddlgD 148 699**********.7888888887766654422..23433322234******.677888999**************755456668 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k+vl +ge+ g+kk++v+y + k+ekt+Wvmh+y+l XP_020696524.1 149 VRWHKTGKTKPVLL-DGEHLGCKKIMVLYvsATKGGKAEKTNWVMHQYHL 197 99********.999*******6545777788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MTGPSWLVDS KRIAKKIKNA SDRADPRSIK WISNPTKACP RCNCVIDNSD VVHEWPGLPH 60 GVKFDPSDQE LLQHLMAKVR KAGAEPHPFI NEFIPTVEKD EGICYTHPQK LPGVKQDGSA 120 SHFFHRTFKA YNTGTRKRRK INTDDLGDVR WHKTGKTKPV LLDGEHLGCK KIMVLYVSAT 180 KGGKAEKTNW VMHQYHLGIG EDEKDGEFVV SKILFQQQLK PCERSIVDPI IKTTEDVAAA 240 TVIMACTGSA TPEYHDECQH MIQTSEETSD QVKVDHDPVE NCEVYPAGEE LHYQSFGTSN 300 GTKELHNEVP AQDSQCAEEP KWWEGESQFL LDSQQLAEGI ALCDEFLHSQ SSYAEDEIKH 360 SKSCLSDYAF IGVEDFKKDL EECQKLSRDN GQSSKSELDT TGDMRLSQLE FGSQDSSLGW 420 EQANLMTN

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MTGPSWLVDS KRIAKKIKNA SDRADPRSIK WISNPTKACP RCNCVIDNSD VVHEWPGLPH  60
GVKFDPSDQE LLQHLMAKVR KAGAEPHPFI NEFIPTVEKD EGICYTHPQK LPGVKQDGSA  120
SHFFHRTFKA YNTGTRKRRK INTDDLGDVR WHKTGKTKPV LLDGEHLGCK KIMVLYVSAT  180
KGGKAEKTNW VMHQYHLGIG EDEKDGEFVV SKILFQQQLK PCERSIVDPI IKTTEDVAAA  240
TVIMACTGSA TPEYHDECQH MIQTSEETSD QVKVDHDPVE NCEVYPAGEE LHYQSFGTSN  300
GTKELHNEVP AQDSQCAEEP KWWEGESQFL LDSQQLAEGI ALCDEFLHSQ SSYAEDEIKH  360
SKSCLSDYAF IGVEDFKKDL EECQKLSRDN GQSSKSELDT TGDMRLSQLE FGSQDSSLGW  420
EQANLMTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-147	NAC family protein