PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020696513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ARR-B | ||||||||
Protein Properties | Length: 530aa MW: 59349 Da PI: 5.6098 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77 | 2.4e-24 | 188 | 239 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 kpr+ Wt eLH++F++av+qL G ++A+Pk+il++m+++gL++e+v+SHLQ R XP_020696513.1 188 KPRVTWTAELHAEFINAVNQL-GLDRAVPKKILDIMNIPGLSRENVASHLQY-R 239 79*******************.*****************************4.4 PP | |||||||
2 | Myb_DNA-binding | 33.8 | 7.9e-11 | 190 | 237 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r WT+e++ +++av+qlG + +k+I m+ g++++++ s++q XP_020696513.1 190 RVTWTAELHAEFINAVNQLGLDraVPKKILDIMNiPGLSRENVASHLQ 237 679********************************************9 PP | |||||||
3 | Response_reg | 72.6 | 1.5e-24 | 19 | 126 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + ++ l+++l + gy +v+ a+++++al+ll+e++ +Dl++ D++mp+mdG++ll+ + e ++lp+i+++ + + + + + G XP_020696513.1 19 VLAVDDDAFSLKMLERLLLECGY-KVTIAQHAHDALKLLRENKdiYDLVISDVKMPDMDGFKLLEILGLE-MDLPVIMLSVDCDFKSVMKGIMHG 111 799********************.***************99999********************999654.48********************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a d+l Kp+ e++ XP_020696513.1 112 AVDYLLKPIRLEDIK 126 **********99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 530 aa Download sequence |
MDKCEDSMIA RGFPNELRVL AVDDDAFSLK MLERLLLECG YKVTIAQHAH DALKLLRENK 60 DIYDLVISDV KMPDMDGFKL LEILGLEMDL PVIMLSVDCD FKSVMKGIMH GAVDYLLKPI 120 RLEDIKVIWK HVVRKSLKEK KGSYDLWNKL DHARTSQDVP IKDFKSHGKE RDHDDSDDSD 180 DEATAQKKPR VTWTAELHAE FINAVNQLGL DRAVPKKILD IMNIPGLSRE NVASHLQYRR 240 GLKRNGMGLS EHFNTYAGTS VYAGSSDFMT LNSRCSAISF ENFGVNGCKT MLAPSTYYPA 300 QQFPSGRATM QPTWFTHPFN GQNDLNRKYA NNTKSSEVIT GPQHSINPQT DQFVTENPGL 360 IRNSLVMNAP TQAYNDLGFQ SFLRRSNQLN SYTQTCQLPL PADLNSCLSS AKQLGYAEGS 420 PKIGTLFSNI HLEGCDSDDN LSMELNTMLP SEQKQQQFSS CSGLDVEMGA INDTSLVDAY 480 SNINENLNQR SPLNFTTVSA RSSSPEIIAC LNDVAYEDDL HAALRQFSRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-76 | ARR-B family protein |