PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020696287.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 323aa    MW: 35656.5 Da    PI: 4.6112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020696287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19114164155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+++AeIrdp+    r  r++lg+++taeeAak ++ a+ +l+g
  XP_020696287.1 114 PRFRGVRRRP-WGKFAAEIRDPT----RrVRVWLGTYDTAEEAAKVYDSAAIQLRG 164
                     689*******.**********84....34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEGQYFAPLN HTVHLEVTSK PFRPQSHRPA MPAFAGANTI RFFCDDIDAT DSDSDSEDCS  60
FDRRRVKRYV QEIRLEERQG RAAGEGKTVK VSAGKRNKKG IALSEKQQPI TGVPRFRGVR  120
RRPWGKFAAE IRDPTRRVRV WLGTYDTAEE AAKVYDSAAI QLRGPDAATN FSTAPAAEAP  180
RQAPARNIST TDLSVSGGYE SSEDSHNICS PTSVLRGFSS STAVKDEPDK PSSSGSIITP  240
EDLTAELNVF DEMPLYSDFL DLSATEPSFF DDPMGQFGYF AEESVIPNTC FDLQSSTCEH  300
GDDFFEDIAD LFPLDPLPAV TIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-33ERF family protein