PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020696183.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 263aa    MW: 28948.7 Da    PI: 4.932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020696183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-1756104355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_020696183.1  56 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 104
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MASPKNQTSN PLNVQEEQNA HMMNFSNSPP SQSSATAASS PTERRGRRKA TEPGRFLGVR  60
RRPWGRYAAE IRDPTTKERH WLGTFDTAHE AALAYDRAAL SMKGTQAKTN FIYPDHNSSF  120
HPFLNPVFHS QTLTLAAAPP PTPFPQLENQ INDFTQFNQP TAAFDQFQPS ELFGFSSDTR  180
SGELSSIIPE SCLNSNSSNS SAASKQVDDV SIAKSYGTNG DENVIDEMGG GIWLDEPLWE  240
FGACSFPTCF DGNMGDYSSS SWM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-43ERF family protein