PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695980.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 396aa    MW: 43793.9 Da    PI: 6.6806
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986e-31179237259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_020695980.1 179 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 237
                     699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MCDYFNRRME KSQGDLADIV RNRGLISPPE SANELLGAAN SWQFLPEPSA VFPRLDDKVF  60
GGDSLADAAD PLLHELARTS FFDSTEASGV QKKMLWEEGN RPNGSLLARM PQISLGKGKG  120
SPVIGPPQLL APGGGGPVEI SSPRLIAGIK RRKSQAKKVV CIPAPAAASG RPSGEVVPSD  180
LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT  240
QRNALAGSTR SHPSKTNNAS STSRSSLHNH KQFTDMKEEP KECSSSNNSS LHVKEEAHEE  300
KEKALTDHQD HNDFDSVFDE SSFNEQMMSN LNQPDNFFAD LAELDPDPMN IIFPKGFMGD  360
KLEEERDNNN NSKAMDPFIM FDWGEGNIFG EAKRGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-68WRKY family protein