PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695977.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 317aa MW: 35464.6 Da PI: 7.8265

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.5	2.6e-32	145	198	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_020695977.1 145 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 198 9****************************************************7 PP
2	Myb_DNA-binding	47.2	5.2e-15	146	197	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_020695977.1 146 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 197 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MELFPAQPDL SLQISPPNAN KPSSSWNNTA ESETVHLAFW SRALDSNSTG TVAAKSSVAG 60 DGFDLSLPNQ GLSNHYPSFL HEPYLGQDLA FLRPIRGIPV YHSPPSFPFP PQQNHRLNYF 120 FDSSRTSPSS RFLPRFPVKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD 180 VKDLTLAHVK SHLQMYRTVK TTDKPLTSGQ GDPIENFDDN LLDLNNIVHG PESSVENGKS 240 AGQNSTNSYG LWSNSSREEL FHDKPKEYTS SGRGRMSPFD QCERQSRSFE MISDLNSSCL 300 SETSSKKPII EFTLGRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	9e-66	G2-like family protein