PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695841.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 372aa    MW: 40701.8 Da    PI: 4.3798
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-183584255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+tae+Aa+a+++a+  l+g
  XP_020695841.1 35 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEDAARAYDEAACLLRG 84
                    789******.7*********33....35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MARKRKSPKS DDADNNSSST AAAADQTPTH RVRKRFVGVR QRPSGRWVAE IKDTIQKIRV  60
WLGTFDTAED AARAYDEAAC LLRGSNTRTN FWPSTATTPA LPSRITALLL HRLKARASGS  120
TMAEEAQTQG QGQVTPLQYE NPQAPQPQVK EEEEEEEEEE ESGNDEIPFE YFLNEPCEST  180
DVVSGELEEE GEEKMGVDLN EMDFQYGGNY YSPFEIAEGM EEEEEWAGGG GGGEDGSSML  240
SAAMKRMKYE RKISASLYAF NGISECLKLK LGGRNGGGDQ AMNDQLLSLS KACKRQRVDD  300
VTERVEVKNE DSETVSSTIP PSSSSSSSSS SYSSSCLKKT PPPAALNTES EWSIWGSLDL  360
SPICVASNAV KL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1272278GGRNGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-22ERF family protein