PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695760.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 146aa MW: 16192.7 Da PI: 10.6044 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.2e-20 | 9 | 58 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd + kr+r++lg+f+++eeAa a+++a+++l+g XP_020695760.2 9 HFRGVRKRP-WGRYAAEIRDpW----KRARVWLGTFDSPEEAASAYDQAARALRG 58 69*******.**********77....26*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MASRGGEVHF RGVRKRPWGR YAAEIRDPWK RARVWLGTFD SPEEAASAYD QAARALRGPK 60 AKTNFPSPPP PPPPPIHLPL DLNQLPCHLW PHYPLPSPPP PPPPATPLLL GSFLRREPAP 120 LPEPRRGLPF DLNEPPPPSA ASLLFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 5e-33 | ERF family protein |