PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Whirly | ||||||||
Protein Properties | Length: 235aa MW: 26071 Da PI: 9.6829 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 181.3 | 1.8e-56 | 57 | 193 | 1 | 137 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s++k+kaal + +v ptf+++dsg+++++++G +ll++++a+++rkyd e+kq falsatev+ l++l++ esceffhdp++k+s eG+v+k+l XP_020695738.1 57 SIFKGKAALLMSPVPPTFTKMDSGHQRVDKKGVVLLKFIPAIGQRKYDSERKQFFALSATEVGCLISLGPDESCEFFHDPSMKSSLEGQVKKTLT 151 79********************************************************************************************* PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 + Pl dG G+++nlsv n ++k+ne+f++Pv+kaef+v+r++ XP_020695738.1 152 ISPLNDGGGYMFNLSVMNAVQKTNERFTLPVTKAEFSVMRTA 193 ***************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MLSRFFSLRR QAVSSNFLAE KLSYVRDASW SYNLVSERGI STAGSERSSG KAFADFSIFK 60 GKAALLMSPV PPTFTKMDSG HQRVDKKGVV LLKFIPAIGQ RKYDSERKQF FALSATEVGC 120 LISLGPDESC EFFHDPSMKS SLEGQVKKTL TISPLNDGGG YMFNLSVMNA VQKTNERFTL 180 PVTKAEFSVM RTACGFVLPL IMGWDRVIGP HLDRTGHGPP EQSAIKMDPA LEWER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 3e-75 | Whirly family protein |