PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695661.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 143aa MW: 15701.7 Da PI: 10.0931 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.8 | 1.6e-19 | 63 | 114 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd s + +r++lg+f+taeeAa a+++a+ +++g+ XP_020695661.1 63 HYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFDTAEEAAVAYDRAAFRMRGA 114 7********.**********432...25**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MAFSRQQTSA NPSQFLPLNE NDSQDMILLQ VLTEASTMAV ASPMSPPTAK RGAESGGELA 60 TRHYRGVRRR PWGKFAAEIR DSSRHGARVW LGTFDTAEEA AVAYDRAAFR MRGAKALLNF 120 PPGFVLSDGK VKKEGEELME SRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 9e-28 | ERF family protein |