PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 299aa MW: 33045.9 Da PI: 10.2292 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.5 | 2.4e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT eE+ l+ +v ++G g W+tI + R+ ++k++w++ XP_020695620.1 5 KQKWTSEEESALKAGVVKHGAGKWRTILKDPEfssvlSLRSNVDLKDKWRN 55 79***********************************88***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGAPKQKWTS EEESALKAGV VKHGAGKWRT ILKDPEFSSV LSLRSNVDLK DKWRNMSVTA 60 NGWGSREKAR MALRKSRQVP KQEEAPLDLT AVDDHNDELV DVKPLAVASP LPLLTAPRKL 120 VSKIDSLIFE AISNLKEPSG SNKTAITMYI EDQYSAPPNL KKLLSIKLKA LTANGKLSKV 180 KRRYRIPQSL PQSEHRRTKS KLFLPEGRQK EPPRVDKKDI KALTKPQIDA ELARMRNMTA 240 EEAALAAAQA VAEAEEAMAE AEEAAREAEA AEADAEAAEA FAEAALKTLK KRAKSNFQF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 289 | 295 | LKKRAKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 5e-86 | MYB_related family protein |