PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695505.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 404aa    MW: 43292.8 Da    PI: 7.3384
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87e-19324358135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ kTp+WR gp+g ktLCnaCG+++++ +l
  XP_020695505.1 324 CTHCGVHKTPQWRAGPQGAKTLCNACGVRFKSGRL 358
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MLHQTLVSFP FSSSSVSPCT IPLSSASAGS ASSALPLFAG RLVSPPPPYP RSSQVEMTTI  60
EDMLASARDQ GFLPDEVEDL LWSADRGNPL GEEFQVEDLL DLRGLPESEE DEEAPRVTEA  120
SFSPPKPSPC VDNEPLGLYT EITFALAETD AASLEWLSRF CDDDCSKEFP SPSPPPSHLG  180
MLPSLPTQIP LSKYSSAGSQ TLAPVPVPSL YSTATAAGSL STEALVPVKA KRSKRLRGSG  240
WSCSSSVKLS DSSPTSSITT LRTASPSPSS SSSSSSFNSY ISYEPPPFTG FLPDDSSAPP  300
KPQKPKKRGR KPKNPIISPA ERRCTHCGVH KTPQWRAGPQ GAKTLCNACG VRFKSGRLLP  360
EYRPACSPTF VSNIHSNSHR KVLEMRRKKD DQVLVSSAPP ISTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-38GATA family protein