PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695503.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family SRS
Protein Properties Length: 313aa    MW: 33442.3 Da    PI: 8.4279
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF7022221.2e-68932453154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....aeaaskrkrelkskkqsalsstkls 92 
                      g++sCqdCGnqakkdC+h+RCRtCCksrgf+C thv+stWvpaakrrerqqq a++++ + + +     a +a+kr+rel s++  ++ +t++s
  XP_020695503.1  93 GGGMSCQDCGNQAKKDCVHMRCRTCCKSRGFQCPTHVRSTWVPAAKRRERQQQVASLQQAHPSPTchrasAGEAPKRPREL-STRPPTIVTTTTS 186
                     5789***************************************************99988776656655556667777776.4444444444444 PP

          DUF702  93 saeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                      +    +  + s+P+e+ss+avfrcvrvs v++ e+++aYqtav+igGhvfkGiLydqG+e+
  XP_020695503.1 187 GGG---TEGMLSFPAELSSPAVFRCVRVSPVEEVEDQFAYQTAVTIGGHVFKGILYDQGPES 245
                     443...447789************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MADFSLGAAG GRNRQRQVAE EVNEGIPPES LFLYSGGGSA RGFELWQRHQ QQIHQRHQQQ  60
QLYSASSGAL LAFGSADEPI GPGPARTGTR GGGGGMSCQD CGNQAKKDCV HMRCRTCCKS  120
RGFQCPTHVR STWVPAAKRR ERQQQVASLQ QAHPSPTCHR ASAGEAPKRP RELSTRPPTI  180
VTTTTSGGGT EGMLSFPAEL SSPAVFRCVR VSPVEEVEDQ FAYQTAVTIG GHVFKGILYD  240
QGPESSTAQY QLHHRGDSSS TAPAVAGIEC TATTTTSVMA TTAGSLPDPS SLYPTALSAF  300
MAGTQFFPHH PRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.12e-62SRS family protein