PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695378.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 319aa    MW: 36249.8 Da    PI: 6.4246
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695378.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.6e-32114170258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     dDgy+WrKYGqK++k+s++prsYYrCt ++C++k++vers+edp++++itYeg H h
  XP_020695378.2 114 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKRQVERSTEDPDMLIITYEGLHLH 170
                     8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MNELEELNRV ERSIGDQTGD EFTMQELLYS SDLPLLPPWK FTEREPLSPS KLISKMLHGS  60
PMKARMSMSC SNGEFDGLSN YRPAIALPEK GLTAKMENKY TLRIKTYGIN GVADDGYKWR  120
KYGQKSIKNS PNPRSYYRCT NPRCNAKRQV ERSTEDPDML IITYEGLHLH YTYSHFLHSQ  180
AHDLSITKKP KTNSVDVQPR LFDQDQHLQT IVLQEPLIIG RDGQQDNNLV EVEGFGKSAM  240
GDEIMQEETL YNNNKNNRHC SQGLLEDIVP LMVRKPSSPT TSSNEPSYPS QASSPSYSSS  300
LCWTPETFHF AESVLSSIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.11e-36WRKY family protein