PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 293aa MW: 32724.6 Da PI: 5.703 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.4 | 1e-17 | 94 | 147 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_020695191.1 94 KKRRLNMEQVRTLERNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 147 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.1 | 3.8e-41 | 93 | 185 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdyeaLkr+++ ++++n++L++++++L++el++ XP_020695191.1 93 EKKRRLNMEQVRTLERNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEALKREFEIVRSQNDALHAHNKKLQAELSA 185 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MYHNQMTYNG LPSSSPSSPP PNFFPQGFLF HSSVETESHQ LSPILPSTPC VNSQDFGGVA 60 AMLGKRTVWS EEMAVAAVAG EEELSDDCSL PGEKKRRLNM EQVRTLERNF ELGNKLEPER 120 KMQLARALGL QPRQIAIWFQ NRRARWKTKQ LEKDYEALKR EFEIVRSQND ALHAHNKKLQ 180 AELSALKGRD GAELINLNKE TEGSSSNRSE NSCDINLDIS RTAAIDGPAM NPNETGRQFF 240 PSYRPTTNVT QLPKIENAIP TAAAAGGSGN DENFCNIFCG VDEPSAFWPW TEH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 150 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 5e-86 | HD-ZIP family protein |