PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695178.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 323aa MW: 37078 Da PI: 6.4367

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94	1.2e-29	60	114	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+v gL+++hvkSHLQ +YR+ XP_020695178.1 60 PRLRWTPDLHMCFVRAVERLGGQDRATPKLVLQLMNVRGLSIAHVKSHLQvMYRS 114 8*************************************************88997 PP
2	Myb_DNA-binding	44.4	3.9e-14	61	110	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT++++ +v+av++lGg t+k++ + m+ g++ ++ks++q XP_020695178.1 61 RLRWTPDLHMCFVRAVERLGGQdraTPKLVLQLMNvRGLSIAHVKSHLQV 110 89**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MDSACSEGSE NPNLSEKDED DEEGDENPKT EGSSSNSTVE EGERKINSGS VRQYNRSKIP 60 RLRWTPDLHM CFVRAVERLG GQDRATPKLV LQLMNVRGLS IAHVKSHLQV MYRSKKIDDS 120 GQAVAINPIR TLIEREDQRN LYRHSNLAIL NGFEQRYSNL RYASSWIGHG FWNSLRPGSY 180 SPAADTSFLT HQRPMSNWDF HTRSSSINVR ANTSSNETKL NHKEFNSMHY NENEIPQNMT 240 MRPILKEEDN EPDLNLSLNI ATRKEKRKRT WEEEEEEDNR LSLSLSSTLS RQEEGFRRKG 300 LMVSEFEAGN QQAKVTSTLD LTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-48	G2-like family protein