PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695086.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 381aa    MW: 41658 Da    PI: 4.8687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695086.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.42.6e-21193243155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa+a+++a+++++g
  XP_020695086.2 193 PRYRGVRQRP-WGKWAAEIRDPV----KaARVWLGTFNTAEDAARAYDEAALRFRG 243
                     68********.**********64....55*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MDYIAAFNDN LIHYKGDTST TPAQILSMFR TRLREDLRNG LESDDIERFL LAGAEEEEVE  60
QTANTAEVTV AVPPPPPAAT SFSMFSKFDR EMEMSVIVSA LTHVVAGDHQ AINVGGGGEH  120
LVASGWPVSG SSMGWGGGVK REGEEMSPEL KRFNRGFGEF RSSAGATSSN VGASFQMTAQ  180
SSAHPDTETD IRPRYRGVRQ RPWGKWAAEI RDPVKAARVW LGTFNTAEDA ARAYDEAALR  240
FRGNRAKLNF PENVRLRQPQ PFFQATGSVP QTLIRFQSAD STGDYLEYSR SLQEIAENQR  300
RQRSVLLEQF MSSSSSVASA ESLGSQAVMG DSSSASYFPP FYSAAGQQEV TVSASETREW  360
FTSPPPPEWT GSGSYPPSSS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.14e-27ERF family protein