PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695081.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 315aa    MW: 35637.4 Da    PI: 8.5323
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.42.2e-5691361129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdee++++yL++kv ++   ++++i evd++k+ePwdLp+k+k +ekewyfF++rd+ky+tg r+nrat+sgyWkatgkd+e+++ 
  XP_020695081.1   9 LPPGFRFHPTDEEIITHYLTPKVVNHGAFTARAIGEVDLNKCEPWDLPSKAKLGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDREIYR- 102
                     79********************99999777699***************99999*****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ l+g+kktLvfy+grapkg+kt+Wvmhe+rle
  XP_020695081.1 103 GRLLIGMKKTLVFYRGRAPKGVKTNWVMHEFRLE 136
                     999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSMDESLELP PGFRFHPTDE EIITHYLTPK VVNHGAFTAR AIGEVDLNKC EPWDLPSKAK  60
LGEKEWYFFC QRDRKYPTGM RTNRATESGY WKATGKDREI YRGRLLIGMK KTLVFYRGRA  120
PKGVKTNWVM HEFRLEGKSS LSNLPRSAKD EWVVSRVFHK NSPALKKIPM PGVVVSNLAR  180
MNSFTDELMD SPKLPPLTDS PYFNSGAIDV DSFDVKSFME SSAPLNNYYF SSMNNLPYSS  240
NPPPCSSYQQ QFPYSTAMQG HQYCKAEQFS NQSMISQDTG DRNTETSSVI SKIDMASCAS  300
YGGGGVIDLA NLWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.21e-102NAC family protein