PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694908.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 377aa    MW: 39787.9 Da    PI: 6.7195
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694908.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.3e-12308353655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+e++P+     +k  s a++L +Av++Ik Lq
  XP_020694908.1 308 SIAERERRTRISEKLRKLQEIVPNM----DKQTSTADMLDLAVQHIKGLQ 353
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MSQSHSTAGG VSPPMNAAVH RAAGQQGLTR YGSAPGSLLA RAADSVIAGA GDGGFRTTIG  60
SDGQMSRFFP RDSPCLASNS RFQAAASVGV ASDEVEIQRS GGGGSSASVG LQQPFDLGVD  120
SPVRDMASAA AVAGEARAGG SHLTRQHSSP AGFFSHLMVD SAGFAASRGT RSYFQPANES  180
TNALTGRRLK SQLSFSRQDA VSQISEISIP EMGESSDEAG GNAGQSYVPS NYPISSWDET  240
NSIVFSTSNK HSRDNGDIIS SLNNIDSQYG LPGTSVDMSV VDKLLQIQQD SAPFKIRAKR  300
GCATHPRSIA ERERRTRISE KLRKLQEIVP NMDKQTSTAD MLDLAVQHIK GLQSQIQILK  360
QEQTSCTCVS NDEDSLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.15e-66bHLH family protein