PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694814.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 274aa    MW: 30236.8 Da    PI: 5.3713
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.93.2e-26102162158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     ++Dgy+WrKYGqK++ gs+f r+YYrC+++   gCp++k+v+rs++d ++++i  +g+H++
  XP_020694814.1 102 VNDGYSWRKYGQKVILGSKFHRAYYRCSHRdtlGCPATKQVQRSDDDSSLFQISLHGDHTC 162
                     58***************************99999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEINLLINAL NQGNEQIREL EAQLDQPNSS EACKSLASQV QAALATAISM AKLLNQPAKA  60
SESPLLATES PRSENSEKVF KKRKTKTRLN TQVLLCSPSS AVNDGYSWRK YGQKVILGSK  120
FHRAYYRCSH RDTLGCPATK QVQRSDDDSS LFQISLHGDH TCGNHHCRRI PELPSELHNT  180
SPEAERLMIV SGDLQPGFSL TSPSICGPSN DISAPNLRGS GSEMAEMLSG ASWTMSESPI  240
ENWDFKDDFD TLWSSTTIES TMVEFGAEFP FDFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-30WRKY family protein