PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020694813.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 250aa MW: 28556.2 Da PI: 8.5892 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.2 | 6.5e-53 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+ +yL+kkv+ + ++l +vi++vd++k+ePwdL+ k ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_020694813.2 10 VPPGFRFHPTEEELLYYYLRKKVAYEAIDL-DVIRDVDLNKLEPWDLNdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI 103 69****************************.9***************843444443456************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++ +g++ktLvfy+grap+g ktdW+mheyrl XP_020694813.2 104 HLSNSKRIGMRKTLVFYTGRAPHGLKTDWIMHEYRL 139 **********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MNSGNGQLAV PPGFRFHPTE EELLYYYLRK KVAYEAIDLD VIRDVDLNKL EPWDLNDKCR 60 IGSGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIHLSNSKR IGMRKTLVFY 120 TGRAPHGLKT DWIMHEYRLD DDTSDVQEDS WVVCRVFKKK NLYKCNNIPS DQILPQETNL 180 NLFKAPPCPN SFPQPQTHPS FDHFSFLSNN HNNNNTMHLP QLLSSDQSSA AMPPPPPSSL 240 PLTSSALTIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.1 | 3e-93 | NAC family protein |