PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694734.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB
Protein Properties Length: 296aa    MW: 33261.2 Da    PI: 7.9899
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.9e-103077247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT++E +l+ +a +++  +   +W  +a+ ++ g+t  +++s+++++
   XP_020694734.1 30 GNWTQQENKLFEKALARFDRDtpeRWLMVAKLIP-GKTVDDVVSHYRDL 77
                     89*****************99*************.***********986 PP
2Myb_DNA-binding47.93.1e-15137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+++++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_020694734.1 137 PWTEEEHKRFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MMTNSGMEVL SPAPAYFSNS YWMRDEKKCG NWTQQENKLF EKALARFDRD TPERWLMVAK  60
LIPGKTVDDV VSHYRDLEED VSCIEAGLIP FPGYSSSSLT LDWENDQSFD GLKQDYYVGG  120
KRSGCRLADH DRKKGVPWTE EEHKRFLLGL KKYGKGDWRN ISRNFVVTRT PTQVASHAQK  180
YFLRLNSGGK DKRRASIHDI TTINMEDNSP PSPSHPSVAT MQSCSAIATG TSEQFSVVVD  240
SKQPNEVANF FSSSINSNQY VQSPYGIQAY GMIQQARNLH HSNLSGPIVG NNGGLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.19e-94MYB family protein