PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020694690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | FAR1 | ||||||||
Protein Properties | Length: 246aa MW: 29000.8 Da PI: 6.9362 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57.8 | 3.7e-18 | 53 | 140 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA++v Fsvrk+++ + + ++i ++fvCsk g+++ + + k + ++++trtgC a+++ ++ g+w+v+k+ + nHela XP_020694690.1 53 IYCHYAHNVSFSVRKDHHCYWPNLRKIRIKDFVCSKAGFKKGIDLN-AKLKYRKSNTRTGCPAMIRFYVDHGGEWKVQKCIESYNHELA 140 7*****************************************9999.88889999********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDIVLEDIED WSEMKGFTQE LQLRGGEVLQ QNTQHNLDIL SVVCNSEKEA YEIYCHYAHN 60 VSFSVRKDHH CYWPNLRKIR IKDFVCSKAG FKKGIDLNAK LKYRKSNTRT GCPAMIRFYV 120 DHGGEWKVQK CIESYNHELA RPEDQHLLRS YRNISEEKAF VLKSMMDAEI RTIDAFTYLA 180 DEVGGRGYVR FSKRDAYNFV QKGKRGKIET VDTNSLIELF KDRANSDNMF AWEVQYDEED 240 RLMNFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-18 | FAR1 family protein |